tools_align_and_tag.cwl
Travis CI User edited this page Feb 4, 2020
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align with bwa_mem and tag
mgibio/alignment_helper-cwl:1.0.0
| Name | Label | Description | Type | Secondary Files |
|---|---|---|---|---|
| bam | File | |||
| readgroup | string | |||
| reference | ['string', 'File'] | ['.amb', '.ann', '.bwt', '.pac', '.sa'] |
| Name | Label | Description | Type | Secondary Files |
|---|---|---|---|---|
| aligned_bam | stdout |