tools_varscan_somatic.cwl
Travis CI User edited this page Feb 4, 2020
·
3 revisions
This page is auto-generated. Do not edit.
varscan v2.4.2 somatic
mgibio/cle:v1.3.1
| Name | Label | Description | Type | Secondary Files |
|---|---|---|---|---|
| tumor_bam | File | ['^.bai'] | ||
| normal_bam | File | ['^.bai'] | ||
| reference | ['string', 'File'] | ['.fai', '^.dict'] | ||
| strand_filter | int? | |||
| min_coverage | int? | |||
| min_var_freq | float? | |||
| p_value | float? | |||
| roi_bed | File? |
| Name | Label | Description | Type | Secondary Files |
|---|---|---|---|---|
| snvs | File | |||
| indels | File |