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tools_stringtie.cwl

APipe Tester edited this page Jul 14, 2021 · 6 revisions

Documentation for stringtie.cwl

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Overview

StringTie

Docker Requirement

quay.io/biocontainers/stringtie:2.1.4--h7e0af3c_0

Inputs

Name Label Description Type Secondary Files
strand ['null', {'type': 'enum', 'symbols': ['first', 'second', 'unstranded']}]
reference_annotation File
sample_name string
bam File

Outputs

Name Label Description Type Secondary Files
transcript_gtf File
gene_expression_tsv File
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