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tools_generate_qc_metrics.cwl

Travis CI User edited this page Feb 4, 2020 · 4 revisions

Documentation for generate_qc_metrics.cwl

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Overview

Picard: RNA Seq Metrics

Docker Requirement

mgibio/rnaseq:1.0.0

Inputs

Name Label Description Type Secondary Files
refFlat File
ribosomal_intervals File?
strand ['null', {'type': 'enum', 'symbols': ['first', 'second', 'unstranded']}]
bam File

Outputs

Name Label Description Type Secondary Files
metrics File
chart File?
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