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tools_bam_to_cram.cwl

Travis CI User edited this page Jan 5, 2021 · 4 revisions

Documentation for bam_to_cram.cwl

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Overview

BAM to CRAM conversion

Docker Requirement

quay.io/biocontainers/samtools:1.11--h6270b1f_0

Inputs

Name Label Description Type Secondary Files
reference ['string', 'File'] ['.fai', '^.dict']
bam File

Outputs

Name Label Description Type Secondary Files
cram stdout
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